C library for high-throughput sequencing data formats - samtools/htslib. Samtools and BCFtools both use HTSlib internally, but these source packages contain their own copies of htslib so they can be built independently. Downloads - Samtools - Documentation - SAMtools mpileup - Development. The code uses HTSlib internally, but these source packages contain their own copies of htslib so they can be built independently. HTSlib is also distributed as a .
Documentation for BCFtools, SAMtools, and HTSlib's utilities is available by using man command on the command line. The manual pages for several releases. Versions, , , , , , , , , , , License, MIT. Recipe, broadstreetselfstorage.com License: MIT; Home: broadstreetselfstorage.com; total downloads; Last upload: 2 months and 7 days ago conda install -c bioconda htslib.
HTSlib is a software library for manipulating various sequencing and variant file formats: SAM, BAM, CRAM, VCF, and BCF. SAMtools and BCFtools are. EDIT. Wait, you're using apt-get to install prerequisites but not the actual software you need? Why is that? Pretty sure samtools is available on. htslib-test: Test data for HTSlib libhts-dev: development files for the HTSlib libhts- private-dev: private development files for the HTSlib (use with care) libhts2: C. Bioconductor version: Release (). This package provides version of the ' HTSlib' C library for high-throughput sequence analysis. The package is primarily .